Align phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) (EC 5.4.2.2) (characterized)
to candidate 206872 DVU1428 phosphoglucomutase, alpha-D-glucose phosphate-specific
Query= BRENDA::A0A0H3NJ17 (546 letters) >MicrobesOnline__882:206872 Length = 551 Score = 659 bits (1699), Expect = 0.0 Identities = 328/547 (59%), Positives = 406/547 (74%), Gaps = 1/547 (0%) Query: 1 MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGTSGHRGSAGRHSFNEPH 60 M++H AG+ L+N+ L +YY P+ E V FGTSGHRGS+ +FNE H Sbjct: 1 MSVHPLAGERPSHDRLVNIPALMGEYYTGHPDTTAVERRVAFGTSGHRGSSLHGTFNEEH 60 Query: 61 ILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQENNGFTPT 120 ILA+ QA+ + R ++GI GP ++G DTHALSE A + LEVLAANGV+V +Q GFTPT Sbjct: 61 ILAVTQAVCDIRREDGIAGPLFLGMDTHALSECAHRTALEVLAANGVNVRLQTGGGFTPT 120 Query: 121 PAVSNAILVHNK-KGGPLADGIVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANA 179 P +S+AIL N + P ADG+VITPSHNPPEDGG KYNPP+GGPADT VT+ +E RAN Sbjct: 121 PVISHAILCWNAHRDRPRADGVVITPSHNPPEDGGFKYNPPHGGPADTTVTRRIERRANE 180 Query: 180 LLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVDMAAIQKAGLTLGVDPLGGS 239 LL GL GV+R+ L A+ + ++AVDLV +V LA ++DM AI+ AGL + DPLGGS Sbjct: 181 LLDNGLAGVRRVVLHKALRTPGIEAVDLVSAYVNDLASVLDMDAIRGAGLRIAADPLGGS 240 Query: 240 GIEYWKRIAEHYKLNLTLVNDQVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDL 299 + YW IAE Y L++T+VN + D TFRFM DKDG +RMDCSS AM GL+ LR +D+ Sbjct: 241 SLAYWDPIAEKYGLDITVVNREADPTFRFMPQDKDGKVRMDCSSPWAMRGLIDLRQSYDI 300 Query: 300 AFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPLWGKDVAVGKTLVSSAMIDRVV 359 AF NDPD DRHGIVT GL+NPNHY+A A+ YL++HRP W +GKTLV+S+M+DRV Sbjct: 301 AFGNDPDADRHGIVTAQGLLNPNHYIAAAVWYLYRHRPGWNTTCGIGKTLVTSSMVDRVA 360 Query: 360 NDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAA 419 LGRK+VEVPVGFKWFV L DGS GFGGEESAGASFLR DGTPWSTDKDGIIM LLAA Sbjct: 361 KLLGRKVVEVPVGFKWFVPLLLDGSCGFGGEESAGASFLRSDGTPWSTDKDGIIMNLLAA 420 Query: 420 EITAVTGKNPQEHYNELAARFGAPSYNRLQASATSAQKAALSKLSPEMVSASTLAGDPIT 479 E+ AV ++P E Y EL R G P Y RLQ+ AT+AQ+A + L+PE V A++LAG PIT Sbjct: 421 EMMAVEERSPSEIYAELTERCGTPYYERLQSPATAAQRAVFAGLTPERVKATSLAGAPIT 480 Query: 480 ARLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYCESFLGEEHRKQIEKEAVEIV 539 A LT APGNGA+IGGLKV+TD+GWFAARPSGTED YKIY ESF+ EH ++I+K+AV+IV Sbjct: 481 AMLTHAPGNGAAIGGLKVVTDDGWFAARPSGTEDMYKIYTESFVSPEHLQRIQKDAVDIV 540 Query: 540 SEVLKNA 546 + + +A Sbjct: 541 ASIFADA 547 Lambda K H 0.316 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 950 Number of extensions: 32 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 546 Length of database: 551 Length adjustment: 36 Effective length of query: 510 Effective length of database: 515 Effective search space: 262650 Effective search space used: 262650 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 53 (25.0 bits)
Align candidate 206872 DVU1428 (phosphoglucomutase, alpha-D-glucose phosphate-specific)
to HMM TIGR01132 (pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2))
../bin/blast/fastacmd -i /tmp/list.7871.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.7871.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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