GapMind for catabolism of small carbon sources

 

Protein WP_011384660.1 in Magnetospirillum magneticum AMB-1

Annotation: NCBI__GCF_000009985.1:WP_011384660.1

Length: 551 amino acids

Source: GCF_000009985.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
4-hydroxybenzoate catabolism hcl lo Benzoate--CoA ligase; Benzoyl-CoA synthetase; EC 6.2.1.25 (characterized) 34% 99% 253.1 aerobic 2-aminobenzoate-CoA ligase type I (EC 6.2.1.32) 50% 508.4
propionate catabolism prpE lo Acyl-coenzyme A synthetase ACSM3, mitochondrial; Acyl-CoA synthetase medium-chain family member 3; Butyrate--CoA ligase 3; Butyryl-coenzyme A synthetase 3; Middle-chain acyl-CoA synthetase 3; Propionate--CoA ligase; Protein SA homolog; EC 6.2.1.2; EC 6.2.1.17 (characterized) 31% 91% 235 aerobic 2-aminobenzoate-CoA ligase type I (EC 6.2.1.32) 50% 508.4

Sequence Analysis Tools

Software error:

Failed to contact NCBI eutils at https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=assembly&retmax=100&term=GCF_000009985.1

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