GapMind for catabolism of small carbon sources

 

Protein WP_050750703.1 in Magnetospirillum magneticum AMB-1

Annotation: NCBI__GCF_000009985.1:WP_050750703.1

Length: 405 amino acids

Source: GCF_000009985.1 in NCBI

Candidate for 3 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
2-deoxy-D-ribonate catabolism garK hi D-glycerate 2-kinase (EC 2.7.1.-) (characterized) 60% 96% 456.4 Glycerate kinase; HBeAg-binding protein 4; EC 2.7.1.31 36% 148.7
2-deoxy-D-ribose catabolism garK hi D-glycerate 2-kinase (EC 2.7.1.-) (characterized) 60% 96% 456.4 Glycerate kinase; HBeAg-binding protein 4; EC 2.7.1.31 36% 148.7
D-glucuronate catabolism garK hi D-glycerate 2-kinase (EC 2.7.1.-) (characterized) 60% 96% 456.4 Glycerate kinase; HBeAg-binding protein 4; EC 2.7.1.31 36% 148.7

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000009985.1

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