Align lactoylglutathione lyase (EC 4.4.1.5) (characterized)
to candidate WP_011384864.1 AMB_RS12480 lactoylglutathione lyase
Query= BRENDA::P0A0T3 (138 letters) >NCBI__GCF_000009985.1:WP_011384864.1 Length = 130 Score = 189 bits (479), Expect = 2e-53 Identities = 84/126 (66%), Positives = 103/126 (81%) Query: 2 RLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNW 61 R LHTM+RVGNL++S+ FY ++LGMKLLRR DYPEGRFTLAFVGYG+E +TV+ELTHNW Sbjct: 5 RFLHTMIRVGNLDRSIHFYTSLLGMKLLRRTDYPEGRFTLAFVGYGEEASNTVVELTHNW 64 Query: 62 DTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKI 121 DTE Y+LG +GH+A+ V D Y+AC ++ G + R GPMKHG+T+IAFVEDPDGYKI Sbjct: 65 DTESYELGGGFGHLALGVPDIYKACAELEAAGAKITRAPGPMKHGSTIIAFVEDPDGYKI 124 Query: 122 EFIQKK 127 E IQ K Sbjct: 125 ELIQAK 130 Lambda K H 0.318 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 106 Number of extensions: 1 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 138 Length of database: 130 Length adjustment: 15 Effective length of query: 123 Effective length of database: 115 Effective search space: 14145 Effective search space used: 14145 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 42 (20.8 bits)
Align candidate WP_011384864.1 AMB_RS12480 (lactoylglutathione lyase)
to HMM TIGR00068 (gloA: lactoylglutathione lyase (EC 4.4.1.5))
../bin/blast/fastacmd -i /tmp/list.5898.in -d ../tmp/orgsFit/orgs.faa -p T > /tmp/gapView.5898.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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