GapMind for catabolism of small carbon sources

 

Protein WP_007675527.1 in Cronobacter condimenti 1330

Annotation: NCBI__GCF_000319285.1:WP_007675527.1

Length: 280 amino acids

Source: GCF_000319285.1 in NCBI

Candidate for 18 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
trehalose catabolism thuG lo ABC-type transporter, integral membrane subunit, component of Trehalose porter. Also binds sucrose (Boucher and Noll, 2011). Induced by glucose and trehalose. Directly regulated by trehalose-responsive regulator TreR (characterized) 31% 100% 176.8 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-maltose catabolism thuG lo ABC transporter for D-Trehalose, permease component 2 (characterized) 36% 99% 175.3 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
sucrose catabolism thuG lo ABC transporter for D-Trehalose, permease component 2 (characterized) 36% 99% 175.3 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
L-fucose catabolism SM_b21105 lo ABC transporter for L-Fucose, permease component 2 (characterized) 33% 100% 159.5 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-maltose catabolism malG_Aa lo Binding-protein-dependent transport systems inner membrane component (characterized, see rationale) 33% 85% 150.2 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-cellobiose catabolism msdB2 lo Binding-protein-dependent transport systems inner membrane component (characterized, see rationale) 31% 92% 149.8 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-maltose catabolism malG_Sm lo MalG, component of Maltose/Maltotriose/maltodextrin (up to 7 glucose units) transporters MalXFGK (MsmK (3.A.1.1.28) can probably substitute for MalK; Webb et al., 2008) (characterized) 31% 97% 145.2 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
trehalose catabolism malG lo MalG, component of Maltose/Maltotriose/maltodextrin (up to 7 glucose units) transporters MalXFGK (MsmK (3.A.1.1.28) can probably substitute for MalK; Webb et al., 2008) (characterized) 31% 97% 145.2 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
N-acetyl-D-glucosamine catabolism ngcG lo NgcG, component of N-Acetylglucosamine/N,N'-diacetyl chitobiose porter (NgcK (C) not identified) (characterized) 30% 85% 129 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-glucosamine (chitosamine) catabolism ngcG lo NgcG, component of N-Acetylglucosamine/N,N'-diacetyl chitobiose porter (NgcK (C) not identified) (characterized) 30% 85% 129 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-cellobiose catabolism gtsC lo Sugar ABC transporter permease (characterized, see rationale) 31% 100% 125.9 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-glucose catabolism gtsC lo Sugar ABC transporter permease (characterized, see rationale) 31% 100% 125.9 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
lactose catabolism gtsC lo Sugar ABC transporter permease (characterized, see rationale) 31% 100% 125.9 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-maltose catabolism gtsC lo Sugar ABC transporter permease (characterized, see rationale) 31% 100% 125.9 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
sucrose catabolism gtsC lo Sugar ABC transporter permease (characterized, see rationale) 31% 100% 125.9 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
trehalose catabolism gtsC lo Sugar ABC transporter permease (characterized, see rationale) 31% 100% 125.9 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-mannitol catabolism mtlG lo SmoG, component of Hexitol (glucitol; mannitol) porter (characterized) 30% 100% 119.4 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0
D-cellobiose catabolism cebG lo CBP protein aka CebG, component of The cellobiose/cellotriose (and possibly higher cellooligosaccharides), CebEFGMsiK [MsiK functions to energize several ABC transporters including those for maltose/maltotriose and trehalose] (characterized) 30% 75% 84.7 Inner membrane ABC transporter permease protein YcjP, component of Probable glucoside uptake porter, YcjNOPV 89% 500.0

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