GapMind for catabolism of small carbon sources

 

Protein WP_054340819.1 in Neptunomonas antarctica S3-22

Annotation: NCBI__GCF_001305295.1:WP_054340819.1

Length: 311 amino acids

Source: GCF_001305295.1 in NCBI

Candidate for 9 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
4-hydroxybenzoate catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
L-lactate catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
acetate catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
2'-deoxyinosine catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
2-deoxy-D-ribose catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
ethanol catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
L-threonine catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
thymidine catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4
L-tryptophan catabolism pta med Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 56% 86% 315.5 phosphate butyryltransferase (EC 2.3.1.19) 41% 218.4

Sequence Analysis Tools

Software error:

Failed to contact NCBI datasets API at https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/accession/GCF_001305295.1/dataset_report

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