GapMind for catabolism of small carbon sources

 

Protein WP_066329757.1 in Flavobacterium glycines Gm-149

Annotation: NCBI__GCF_900100165.1:WP_066329757.1

Length: 763 amino acids

Source: GCF_900100165.1 in NCBI

Candidate for 9 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
4-hydroxybenzoate catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
L-lactate catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
acetate catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
2'-deoxyinosine catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
2-deoxy-D-ribose catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
ethanol catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
L-threonine catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
thymidine catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6
L-tryptophan catabolism pta lo Phosphate acetyltransferase; EC 2.3.1.8; Phosphotransacetylase (uncharacterized) 38% 100% 216.9 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) (EC 1.1.1.40) 50% 675.6

Sequence Analysis Tools

Software error:

Failed to contact NCBI datasets API at https://api.ncbi.nlm.nih.gov/datasets/v2alpha/genome/accession/GCF_900100165.1/dataset_report

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