Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2712: 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq)
is similar to:

ARADH_HALVD / D4GP33: L-arabinose 1-dehydrogenase (NAD(P)(+)); L-AraDH; EC from Haloferax volcanii
xacB / D4GP33: L-arabinose 1-dehydrogenase (NADP+) monomer (EC from Haloferax volcanii
D4GP33: L-arabinose 1-dehydrogenase [NAD(P)+] (EC; L-arabinose 1-dehydrogenase (EC from Haloferax volcanii

28% id,
64% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory