Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 44 curated entries in PaperBLAST's database that match '1.1.1.44' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_1677: 6-phosphogluconate dehydrogenase (RefSeq) is similar to:	PaperBLAST
6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis	48% id, 99% cov
SPBC660.16 / RF\|NP_595095.1: phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Schizosaccharomyces pombe P78812: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Schizosaccharomyces pombe	47% id, 98% cov
P96789: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Lactococcus lactis	46% id, 98% cov
Q762L5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Klebsiella pneumoniae	46% id, 99% cov
6PGD_ECOLI / P00350: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Escherichia coli Gnd / b2029: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli gnd / P00350: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli P00350: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Escherichia coli	45% id, 99% cov
Q9DCD0: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Mus musculus	46% id, 97% cov
6PGD_RAT / P85968: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Rattus norvegicus P85968: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Rattus norvegicus	46% id, 97% cov
6PGD_HUMAN / P52209: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Homo sapiens PGD / P52209: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Homo sapiens P52209: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Homo sapiens	45% id, 97% cov
6PGD2_YEAST / P53319: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Saccharomyces cerevisiae P53319: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Saccharomyces cerevisiae	45% id, 97% cov
P52208: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Synechocystis sp.	45% id, 97% cov
6PGD1_YEAST / P38720: 6-phosphogluconate dehydrogenase, decarboxylating 1; EC 1.1.1.44 from Saccharomyces cerevisiae P38720: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Saccharomyces cerevisiae	45% id, 97% cov
GND1: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Candida albicans	46% id, 94% cov
6PGD_SHEEP / P00349: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Ovis aries	45% id, 97% cov
A0A0D1CRJ9: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Ustilago maydis	45% id, 96% cov
Q6NHC5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Corynebacterium glutamicum	43% id, 99% cov
6PGD_AGGAC / P70718: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Aggregatibacter actinomycetemcomitans	44% id, 97% cov
6PGD1_SPIOL / Q94KU1: 6-phosphogluconate dehydrogenase, decarboxylating 1; EC 1.1.1.44 from Spinacia oleracea	43% id, 97% cov
6PGD3_ARATH / Q9FFR3: 6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana Q9FFR3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	41% id, 98% cov
6PGD2_ARATH / Q9FWA3: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Arabidopsis thaliana Q9FWA3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	42% id, 97% cov
6PGD1_ARATH / Q9SH69: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana Q9SH69: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	41% id, 98% cov
6PGD1_ORYSJ / Q9LI00: 6-phosphogluconate dehydrogenase, decarboxylating 1; OsG6PGH1; EC 1.1.1.44 from Oryza sativa Q9LI00: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Oryza sativa	41% id, 97% cov
Q9WYR9: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Thermotoga maritima	39% id, 99% cov
Q8IKT2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Plasmodium falciparum	39% id, 100% cov
6PGD2_ORYSJ / Q2R480: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; OsG6PGH2; EC 1.1.1.44 from Oryza sativa	41% id, 93% cov
6PGD2_SPIOL / Q94KU2: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; EC 1.1.1.44 from Spinacia oleracea	43% id, 88% cov
Q6WAT5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Trypanosoma cruzi	35% id, 99% cov
6PGD_TRYBB / P31072: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Trypanosoma brucei	33% id, 99% cov
Q2RIZ2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica	34% id, 92% cov
A0A1J5NX54: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica	33% id, 92% cov
More...

Shewana3_2554: 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) is similar to:	PaperBLAST
Q6NHC5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Corynebacterium glutamicum	27% id, 56% cov
Q9WYR9: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Thermotoga maritima	25% id, 55% cov
6PGD_AGGAC / P70718: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Aggregatibacter actinomycetemcomitans	29% id, 44% cov
6PGD2_ORYSJ / Q2R480: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; OsG6PGH2; EC 1.1.1.44 from Oryza sativa	27% id, 45% cov
Q8IKT2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Plasmodium falciparum	24% id, 50% cov
Q6WAT5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Trypanosoma cruzi	40% id, 9% cov
6PGD_TRYBB / P31072: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Trypanosoma brucei	41% id, 8% cov
More...

Shewana3_2766: 3-hydroxyisobutyrate dehydrogenase (RefSeq) is similar to:	PaperBLAST
6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis	26% id, 39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory