Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 6 curated entries in PaperBLAST's database that match '1.1.1.77'.

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2938: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

47% id,
100% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

45% id,
100% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

45% id,
99% cov

Shewana3_1788: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

36% id,
99% cov

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

34% id,
98% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

31% id,
97% cov

Shewana3_0261: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

24% id,
99% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

24% id,
88% cov

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

22% id,
90% cov

Shewana3_2712: 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq)
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

24% id,
82% cov

Shewana3_3511: NAD-dependent epimerase/dehydratase (RefSeq)
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

38% id,
24% cov

Shewana3_1379: dTDP-glucose 4,6 dehydratase (RefSeq)
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

30% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory