Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 9 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3050: glutamate synthase subunit alpha (RefSeq)
is similar to:

W1QKE8: L-lactate dehydrogenase (cytochrome) (EC from Ogataea angusta

23% id,
59% cov

CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC from Saccharomyces cerevisiae
CYB2 / P00175: L-lactate dehydrogenase subunit (EC from Saccharomyces cerevisiae
P00175: L-lactate dehydrogenase (cytochrome) (EC from Saccharomyces cerevisiae

28% id,
26% cov

CYB2_TALSN / B8MKR3: L-lactate dehydrogenase (cytochrome); EC from Talaromyces stipitatus

32% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory