Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 42 curated entries in PaperBLAST's database that match '1.1.99.2'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2938: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

28% id,
92% cov

T0Q1Z2: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Saprolegnia diclina

27% id,
93% cov

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens

28% id,
88% cov

More...

Shewana3_1788: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

W4G0G7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces astaci

26% id,
92% cov

X6NPJ7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Reticulomyxa filosa

27% id,
83% cov

A0A024TMA3: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Aphanomyces invadans

26% id,
85% cov

More...

Shewana3_0261: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

S5YSM1: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Bemisia tabaci

27% id,
75% cov

X6NPJ7: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Reticulomyxa filosa

24% id,
49% cov

Shewana3_1428: oxidoreductase domain-containing protein (RefSeq)
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

29% id,
44% cov

Shewana3_2701: oxidoreductase domain-containing protein (RefSeq)
is similar to:
PaperBLAST

gfo / Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis
Q07982: glucose-fructose oxidoreductase (EC 1.1.99.28) from Zymomonas mobilis

27% id,
47% cov

Shewana3_1907: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

K0T042: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Thalassiosira oceanica

26% id,
47% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3528294-3529490 (frame +3) on 248374
is similar to:
PaperBLAST

HOT_HUMAN / Q8IWW8: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; Fe-containing alcohol dehydrogenase; EC 1.1.99.24 from Homo sapiens
Q8IWW8: hydroxyacid-oxoacid transhydrogenase (EC 1.1.99.24) from Homo sapiens
Also see hits to annotated proteins above

28% id,
93% cov

HOT_RAT / Q4QQW3: Hydroxyacid-oxoacid transhydrogenase, mitochondrial; HOT; Alcohol dehydrogenase iron-containing protein 1; ADHFe1; EC 1.1.99.24 from Rattus norvegicus
Also see hits to annotated proteins above

28% id,
93% cov

64452-65654 (frame +3) on 248374
is similar to:
PaperBLAST

L2HDH_ARATH / Q9LES4: L-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.2 from Arabidopsis thaliana

43% id,
9% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory