Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.

These curated entries have 126 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2481: homogentisate 1,2-dioxygenase (RefSeq)
is similar to:
PaperBLAST

SO1963: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Shewanella oneidensis

97% id,
100% cov

Psest_3513: Homogentisate 1,2-dioxygenase (EC 1.13.11.5) from Pseudomonas stutzeri

30% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory