Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 156 curated entries in PaperBLAST's database that match '1.14.14.8'.

These curated entries have 122 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_1965: 2,4-dienoyl-CoA reductase (RefSeq)
is similar to:
PaperBLAST

A0A0U1WKA6: 4'-methoxyisoflavone 2'-hydroxylase (EC 1.14.14.89) from Slackia sp.

28% id,
83% cov

Shewana3_0855: sulfite reductase (NADPH) alpha subunit (RefSeq)
is similar to:
PaperBLAST

A0A0A8KYK4: geraniol 8-hydroxylase (EC 1.14.14.83) from Croton stellatopilosus

31% id,
70% cov

Shewana3_3298: formate dehydrogenase, alpha subunit (RefSeq)
is similar to:
PaperBLAST

A0A0U1WKA6: 4'-methoxyisoflavone 2'-hydroxylase (EC 1.14.14.89) from Slackia sp.

31% id,
26% cov

Shewana3_2823: flavodoxin (RefSeq)
is similar to:
PaperBLAST

A0A0A8KYK4: geraniol 8-hydroxylase (EC 1.14.14.83) from Croton stellatopilosus

29% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory