Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 22 curated entries in PaperBLAST's database that match '1.14.16.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2781: phenylalanine 4-monooxygenase (RefSeq)
is similar to:
PaperBLAST

SO1666: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Shewanella oneidensis

95% id,
100% cov

AO356_03975: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

63% id,
98% cov

Pf6N2E2_2630: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

63% id,
98% cov

More...

Shewana3_3007: chorismate mutase / prephenate dehydratase (RefSeq)
is similar to:
PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

26% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory