Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 183 curated entries in PaperBLAST's database that match '1.2.1.3'.

These curated entries have 135 distinct sequences.

Running ublast with E ≤ 0.01

Found 22 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0250: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

75% id,
100% cov

pedI / B1N7J6: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

74% id,
100% cov

BWI76_RS21985: acetaldehyde dehydrogenase (EC 1.2.1.3) from Klebsiella michiganensis

71% id,
100% cov

More...

Shewana3_1788: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

58% id,
100% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

47% id,
98% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

47% id,
98% cov

More...

Shewana3_0612: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

57% id,
99% cov

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

34% id,
92% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

32% id,
96% cov

More...

Shewana3_3092: succinate semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

55% id,
91% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus
P24549: retinal dehydrogenase (EC 1.2.1.36) from Mus musculus

39% id,
97% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus
P51647: retinal dehydrogenase (EC 1.2.1.36) from Rattus norvegicus

39% id,
97% cov

More...

Shewana3_3905: N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq)
is similar to:
PaperBLAST

ARGC_ECOLI / P11446: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Escherichia coli
ArgC / b3958: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Escherichia coli
argC / P11446: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Escherichia coli
P11446: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Escherichia coli

51% id,
98% cov

ARGC_GEOSE / Q07906: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Geobacillus stearothermophilus

40% id,
95% cov

P9WPZ9: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Mycobacterium tuberculosis

33% id,
92% cov

More...

Shewana3_3105: aldehyde dehydrogenase (acceptor) (RefSeq)
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

45% id,
96% cov

AL2B4_ARATH / Q9SU63: Aldehyde dehydrogenase family 2 member B4, mitochondrial; ALDH2a; EC 1.2.1.3 from Arabidopsis thaliana

44% id,
92% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

43% id,
95% cov

More...

Shewana3_3251: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDH3_BACSU / P46329: Putative aldehyde dehydrogenase AldX; EC 1.2.1.3 from Bacillus subtilis

38% id,
96% cov

AL3B2_HUMAN / P48448: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Homo sapiens

38% id,
97% cov

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

40% id,
90% cov

More...

Shewana3_3107: methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq)
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

35% id,
96% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

33% id,
95% cov

ASC1_DIDFA / A0A5C1REZ4: Aldehyde dehydrogenase; Ascochitine biosynthesis cluster protein 1; EC 1.2.1.3 from Didymella fabae

32% id,
97% cov

More...

Shewana3_0819: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

32% id,
99% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

33% id,
95% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

32% id,
94% cov

More...

Shewana3_2770: methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq)
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

32% id,
95% cov

AL1A1_RABIT / Q8MI17: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Oryctolagus cuniculus

32% id,
96% cov

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

31% id,
98% cov

More...

Shewana3_1837: alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

30% id,
95% cov

Shewana3_4105: L-threonine 3-dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

29% id,
98% cov

Shewana3_2938: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

33% id,
47% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

35% id,
43% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

35% id,
43% cov

Shewana3_0261: iron-containing alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

24% id,
40% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

24% id,
40% cov

Shewana3_3767: N-acetylglutamate synthase (RefSeq)
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

24% id,
37% cov

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

23% id,
29% cov

Shewana3_2713: peptide synthase (RefSeq)
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

20% id,
42% cov

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

23% id,
16% cov

Shewana3_3904: acetylglutamate kinase (RefSeq)
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

27% id,
29% cov

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

26% id,
28% cov

Shewana3_0080: AMP-dependent synthetase and ligase (RefSeq)
is similar to:
PaperBLAST

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

29% id,
25% cov

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

28% id,
22% cov

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

28% id,
20% cov

Shewana3_2386: long-chain-fatty-acid--CoA ligase (RefSeq)
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

28% id,
20% cov

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

29% id,
20% cov

Shewana3_3231: AMP-dependent synthetase and ligase (RefSeq)
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

27% id,
20% cov

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

25% id,
21% cov

Shewana3_2523: acetyl-CoA synthetase (RefSeq)
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

24% id,
22% cov

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis

22% id,
23% cov

Shewana3_1675: AMP-dependent synthetase and ligase (RefSeq)
is similar to:
PaperBLAST

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

24% id,
21% cov

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

23% id,
17% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory