Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 10 curated entries in PaperBLAST's database that match '1.2.1.32' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0250: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

39% id,
99% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

37% id,
99% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

37% id,
98% cov

More...

Shewana3_3092: succinate semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

36% id,
99% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

37% id,
95% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

35% id,
99% cov

More...

Shewana3_3105: aldehyde dehydrogenase (acceptor) (RefSeq)
is similar to:
PaperBLAST

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

37% id,
95% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

36% id,
97% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

36% id,
97% cov

More...

Shewana3_0612: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

31% id,
96% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

30% id,
93% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

29% id,
96% cov

More...

Shewana3_2770: methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq)
is similar to:
PaperBLAST

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

30% id,
98% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

29% id,
98% cov

nbaE / Q83V33: 2-aminomuconate 6-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens
Q83V33: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Pseudomonas fluorescens

30% id,
96% cov

More...

Shewana3_3107: methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq)
is similar to:
PaperBLAST

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

30% id,
99% cov

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

29% id,
99% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

27% id,
99% cov

More...

Shewana3_0819: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

30% id,
95% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

30% id,
95% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

29% id,
97% cov

More...

Shewana3_3251: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL8A1_MOUSE / Q8BH00: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase family 8 member A1; Retinal dehydrogenase 4; EC 1.2.1.32 from Mus musculus

27% id,
87% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
ALDH8A1 / Q9H2A2: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

27% id,
87% cov

AMNC_PSESP / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase; Aminomuconate-semialdehyde dehydrogenase; EC 1.2.1.32 from Pseudomonas sp.
amnC / Q9KWS5: 2-aminomuconic 6-semialdehyde dehydrogenase monomer (EC 1.2.1.32) from Pseudomonas sp.

30% id,
70% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory