Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 13 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3501: glycine cleavage system aminomethyltransferase T (RefSeq)
is similar to:

GCST_ECOLI / P27248: Aminomethyltransferase; Glycine cleavage system T protein; EC from Escherichia coli
GcvT / b2905: aminomethyltransferase (EC from Escherichia coli
gcvT: aminomethyltransferase; EC from Escherichia coli
gcvT / P27248: aminomethyltransferase (EC from Escherichia coli

68% id,
99% cov

BWI76_RS23880: Aminomethyltransferase (EC from Klebsiella michiganensis

68% id,
99% cov

PfGW456L13_1866: Aminomethyltransferase (EC from Pseudomonas fluorescens

37% id,
96% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory