Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0023: 3-ketoacyl-CoA thiolase (RefSeq)
is similar to:
PaperBLAST

Shewana3_0023: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella sp.

100% id,
100% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

92% id,
100% cov

fadA / A0A140NDQ6: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

72% id,
100% cov

More...

Shewana3_2771: acetyl-CoA acetyltransferases (RefSeq)
is similar to:
PaperBLAST

SO1677: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) from Shewanella oneidensis

96% id,
100% cov

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

63% id,
98% cov

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

62% id,
98% cov

More...

Shewana3_1460: 3-ketoacyl-CoA thiolase (RefSeq)
is similar to:
PaperBLAST

FADI_ECOLI / P76503: 3-ketoacyl-CoA thiolase FadI; ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta; EC 2.3.1.16 from Escherichia coli
FadI / b2342: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / P76503: 3-ketoacyl-CoA thiolase FadI (EC 2.3.1.16) from Escherichia coli
fadI / A0A140N9I7: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Escherichia coli

72% id,
99% cov

ECHB_MOUSE / Q99JY0: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Mus musculus

41% id,
88% cov

ECHB_HUMAN / P55084: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Homo sapiens
HADHB / P55084: mitochondrial trifunctional enzyme β subunit (EC 2.3.1.16) from Homo sapiens

40% id,
89% cov

More...

Shewana3_1461: multifunctional fatty acid oxidation complex subunit alpha (RefSeq)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

44% id,
93% cov

Shewana3_0024: multifunctional fatty acid oxidation complex subunit alpha (RefSeq)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

35% id,
94% cov

Shewana3_0721: enoyl-CoA hydratase (RefSeq)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

26% id,
35% cov

Shewana3_0329: 3-oxoacyl-(acyl carrier protein) synthase I (RefSeq)
is similar to:
PaperBLAST

ECHB_RAT / Q60587: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Rattus norvegicus

25% id,
37% cov

ECHB_MOUSE / Q99JY0: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Mus musculus

25% id,
34% cov

Shewana3_2768: enoyl-CoA hydratase (RefSeq)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

34% id,
23% cov

Shewana3_0572: enoyl-CoA hydratase (RefSeq)
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

28% id,
25% cov

Shewana3_2557: 3-oxoacyl-[acyl-carrier-protein] synthase II (RefSeq)
is similar to:
PaperBLAST

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

25% id,
23% cov

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

36% id,
15% cov

thl / P45359: acetoacetyl-CoA thiolase monomer (EC 2.3.1.16) from Clostridium acetobutylicum

40% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1694443-1696656 (frame +1) on 248374
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

44% id,
97% cov

838488-839360 (frame -3) on 248374
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus
Also see hits to annotated proteins above

25% id,
38% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory