Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 38 curated entries in PaperBLAST's database that match '2.3.3.13' as complete word(s).

These curated entries have 31 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3761: 2-isopropylmalate synthase (RefSeq) is similar to:	PaperBLAST
LEU1_SALTY / P15875: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Salmonella typhimurium	67% id, 99% cov
LeuA / b0074: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli leuA / P09151: 2-isopropylmalate synthase (EC 2.3.3.13) from Escherichia coli	67% id, 99% cov
CA265_RS15855: 2-isopropylmalate synthase (EC 2.3.3.13) from Pedobacter sp.	53% id, 98% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	50% id, 99% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	49% id, 99% cov
LEU11_LEPIN / Q8F445: 2-isopropylmalate synthase 1; Alpha-IPM synthase 1; Alpha-isopropylmalate synthase 1; EC 2.3.3.13 from Leptospira interrogans	48% id, 99% cov
LEU1_NEIMB / Q9JZG1: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Neisseria meningitidis Q9JZG1: 2-isopropylmalate synthase (EC 2.3.3.13) from Neisseria meningitidis	47% id, 96% cov
Q72JC9: 2-isopropylmalate synthase (EC 2.3.3.13) from Thermus thermophilus	45% id, 97% cov
LEU1_SULAC / Q4JA78: 2-isopropylmalate synthase; IPMS; Alpha-isopropylmalate synthase; Alpha-IPM synthase; EC 2.3.3.13 from Sulfolobus acidocaldarius	43% id, 96% cov
A0A0G2T6D7: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum pennellii	47% id, 84% cov
K4CJ56: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	45% id, 89% cov
K4C627: 2-isopropylmalate synthase (EC 2.3.3.13) from Solanum lycopersicum	44% id, 88% cov
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	40% id, 95% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	40% id, 93% cov
Q30DX9: 2-isopropylmalate synthase (EC 2.3.3.13) from Brassica insularis	44% id, 85% cov
LEU12_ARATH / Q9C550: 2-isopropylmalate synthase 2, chloroplastic; 2-isopropylmalate synthase 1; Methylthioalkylmalate synthase-like 3; EC 2.3.3.13 from Arabidopsis thaliana Q9C550: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	44% id, 84% cov
LEU11_ARATH / Q9LPR4: 2-isopropylmalate synthase 1, chloroplastic; Methylthioalkylmalate synthase-like 4; EC 2.3.3.13 from Arabidopsis thaliana Q9LPR4: 2-isopropylmalate synthase (EC 2.3.3.13) from Arabidopsis thaliana	43% id, 86% cov
Q2RAP8: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	44% id, 82% cov
Q2QXY9: 2-isopropylmalate synthase (EC 2.3.3.13) from Oryza sativa	44% id, 82% cov
Q9FG67: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	45% id, 78% cov
Q9FN52: 2-isopropylmalate synthase (EC 2.3.3.13); methylthioalkylmalate synthase (EC 2.3.3.17) from Arabidopsis thaliana	42% id, 80% cov
B0SN40: 2-isopropylmalate synthase (EC 2.3.3.13) from Leptospira biflexa	34% id, 97% cov
LEU12_LEPIN / Q8F8T4: 2-isopropylmalate synthase 2; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; EC 2.3.3.13 from Leptospira interrogans	34% id, 81% cov
LEU1_YEAST / P06208: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Saccharomyces cerevisiae	26% id, 85% cov
LEU9_YEAST / Q12166: 2-isopropylmalate synthase 2, mitochondrial; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2; Alpha-isopropylmalate synthase II; EC 2.3.3.13 from Saccharomyces cerevisiae	25% id, 88% cov
AMT7_ALTAL / C9K7B8: Isopropyl malate synthase AMT7; AM-toxin biosynthesis protein 7; EC 2.3.3.13 from Alternaria alternata	24% id, 88% cov
LEU1_MYCTO / P9WQB2: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis LEU1_MYCTU / P9WQB3: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Mycobacterium tuberculosis P9WQB3: 2-isopropylmalate synthase (EC 2.3.3.13) from Mycobacterium tuberculosis	26% id, 77% cov
HTYA_ASPRU / K0E4E5: Isopropyl malate synthase htyA; L-homotyrosine biosynthetic cluster protein A; EC 2.3.3.13 from Aspergillus rugulosus	26% id, 62% cov
GLOH_GLAL2 / S3D9F8: Isopropyl malate synthase gloH; L-homotyrosine biosynthesis sub-cluster protein gloH; Pneumocandin biosynthesis cluster protein H; EC 2.3.3.13 from Glarea lozoyensis	27% id, 52% cov
LEU1_CORGL / P42455: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Corynebacterium glutamicum	27% id, 50% cov
More...

Shewana3_3165: oxaloacetate decarboxylase (RefSeq) is similar to:	PaperBLAST
LEU1_METJA / Q58595: 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; EC 2.3.3.13 from Methanocaldococcus jannaschii Q58595: 2-isopropylmalate synthase (EC 2.3.3.13) from Methanocaldococcus jannaschii	24% id, 45% cov
Echvi_3833: 2-isopropylmalate synthase (EC 2.3.3.13) from Echinicola vietnamensis	25% id, 36% cov
LEU1_SOYBN / Q39891: Probable 2-isopropylmalate synthase; Alpha-IPM synthase; Alpha-isopropylmalate synthase; Late nodulin-56; N-56; EC 2.3.3.13 from Glycine max	23% id, 36% cov
BT1861: 2-isopropylmalate synthase (EC 2.3.3.13) from Bacteroides thetaiotaomicron	24% id, 29% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory