Searching in Shewanella sp. ANA-3 (ANA3)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella sp. ANA-3, or try another query
Shewana3_1042: thymidine phosphorylase (RefSeq) is similar to: | PaperBLAST |
Q7CP66: thymidine phosphorylase (EC 2.4.2.4) from Salmonella enterica | 68% id, 100% cov |
Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 68% id, 100% cov |
TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens | 37% id, 91% cov |
Shewana3_0534: glyceraldehyde-3-phosphate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
TYPH_LACRH / P19663: Thymidine phosphorylase; TdRPase; EC 2.4.2.4 from Lacticaseibacillus rhamnosus | 67% id, 91% cov |
Shewana3_0263: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 40% id, 98% cov |
Shewana3_3680: uridine phosphorylase (RefSeq) is similar to: | PaperBLAST |
PNPH_PLAF7 / Q8I3X4: Purine nucleoside phosphorylase; PfPNP; S-methyl-5'-thioinosine phosphorylase; EC 2.4.2.1; EC 2.4.2.44 from Plasmodium falciparum | 27% id, 96% cov |
Shewana3_4085: glycosyl transferase family protein (RefSeq) is similar to: | PaperBLAST |
ARNT_SALTY / O52327: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Polymyxin resistance protein PmrK; Undecaprenyl phosphate-alpha-L-Ara4N transferase; EC 2.4.2.43 from Salmonella typhimurium | 23% id, 91% cov |
AAL34393.1: 4-amino-4-deoxy-L-arabinotransferase (ArnT) (EC 2.4.2.43) | 23% id, 91% cov |
ABF11690.1: 4-amino-4-deoxy-L-arabinosyltransferase (ArnT;ArnTCm;Rmet_4828) (EC 2.4.2.43) | 27% id, 73% cov |
Shewana3_1435: queuine tRNA-ribosyltransferase (RefSeq) is similar to: | PaperBLAST |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 26% id, 68% cov |
ATGT_HALVD / Q9C4M3: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Haloferax volcanii | 27% id, 66% cov |
Q9HI54: tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Thermoplasma acidophilum | 25% id, 53% cov |
Shewana3_1518: anthranilate phosphoribosyltransferase (RefSeq) is similar to: | PaperBLAST |
TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens | 27% id, 29% cov |
Shewana3_1111: (p)ppGpp synthetase I, SpoT/RelA (RefSeq) is similar to: | PaperBLAST |
TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens | 38% id, 15% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory