Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 8 curated entries in PaperBLAST's database that match '2.5.1.65' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3188: cysteine synthase B (RefSeq)
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

44% id,
99% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

36% id,
95% cov

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

35% id,
95% cov

More...

Shewana3_1561: cysteine synthase (RefSeq)
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

38% id,
100% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

36% id,
95% cov

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

32% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory