Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 276 curated entries in PaperBLAST's database that match '2.6.1.1'.

These curated entries have 184 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_1908: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

KDNA_SHEON / Q8EEB1: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase; EC 2.6.1.109 from Shewanella oneidensis
kdnA / Q8EEB1: 8-amino-3,8-dideoxy-D-manno-octulosonate transaminase (EC 2.6.1.109) from Shewanella oneidensis
Q8EEB1: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase (EC 2.6.1.109) from Shewanella oneidensis

98% id,
100% cov

GDPPS_VIBCL / Q06953: GDP-perosamine synthase; EC 2.6.1.102 from Vibrio cholerae
rfbE / Q06953: GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase subunit (EC 2.6.1.102) from Vibrio cholerae

35% id,
81% cov

GDPPS_ECO57 / Q7DBF3: GDP-perosamine synthase; EC 2.6.1.102 from Escherichia coli
perA / Q7DBF3: GDP-perosamine synthase monomer (EC 2.6.1.102) from Escherichia coli

37% id,
74% cov

More...

Shewana3_3091: 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

Sama_2636: gamma-aminobutyrate transaminase (EC 2.6.1.19) from Shewanella amazonensis

88% id,
100% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

72% id,
99% cov

GABT_ECOLI / P22256: 4-aminobutyrate aminotransferase GabT; 5-aminovalerate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.48 from Escherichia coli
GabT / b2662: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli
gabT / P22256: 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.48; EC 2.6.1.11) from Escherichia coli

70% id,
99% cov

More...

Shewana3_4125: glucosamine--fructose-6-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

GLMS_ECOLI / P17169: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Escherichia coli
GlmS / b3729: L-glutamine—D-fructose-6-phosphate aminotransferase (EC 2.6.1.16) from Escherichia coli
glmS / PDB|2BPJ_A: glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; EC 2.6.1.16 from Escherichia coli
glmS / P17169: L-glutamine—D-fructose-6-phosphate aminotransferase (EC 2.6.1.16) from Escherichia coli
P17169: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Escherichia coli

69% id,
100% cov

Q8G545: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Bifidobacterium longum

42% id,
100% cov

GLMS_BACSU / P0CI73: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Bacillus subtilis

41% id,
100% cov

More...

Shewana3_0610: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

ARUC_PSEAE / O30508: Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81 from Pseudomonas aeruginosa
aruC / O30508: succinylornithine transaminase subunit (EC 2.6.1.13; EC 2.6.1.11; EC 2.6.1.81) from Pseudomonas aeruginosa

65% id,
98% cov

HP15_3042: acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) from Marinobacter adhaerens

63% id,
99% cov

ARGD_ECOLI / P18335: Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Escherichia coli
Dtu / b3359: N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17) from Escherichia coli
argD / P18335: N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17) from Escherichia coli

62% id,
100% cov

More...

Shewana3_2121: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

63% id,
100% cov

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

53% id,
99% cov

phhC / P43336: tyrosine aminotransferase subunit (EC 2.6.1.1) from Pseudomonas aeruginosa

48% id,
98% cov

More...

Shewana3_3106: beta alanine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

Q7WWK8: beta-alanine-pyruvate transaminase (EC 2.6.1.18) from Achromobacter denitrificans

62% id,
99% cov

APTA_CAUVC / Q9A3Q9: Omega-aminotransferase; Beta-alanine--pyruvate aminotransferase; EC 2.6.1.-; EC 2.6.1.18 from Caulobacter vibrioides

57% id,
98% cov

BAUA_PSEAE / Q9I700: Beta-alanine--pyruvate aminotransferase; Beta-A--Py AT; Beta-alanine--pyruvate transaminase; Omega-amino acid aminotransferase; Omega-amino acid AT; Omega-amino acid--pyruvate aminotransferase; Omega-APT; EC 2.6.1.18 from Pseudomonas aeruginosa

50% id,
97% cov

More...

Shewana3_1974: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

61% id,
99% cov

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

49% id,
100% cov

phhC / P43336: tyrosine aminotransferase subunit (EC 2.6.1.1) from Pseudomonas aeruginosa

48% id,
98% cov

More...

Shewana3_1973: phosphoserine aminotransferase (RefSeq)
is similar to:
PaperBLAST

SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli

59% id,
100% cov

Shewana3_1303: polysaccharide biosynthesis protein (RefSeq)
is similar to:
PaperBLAST

GDPPS_CAUVC / Q9A9H3: GDP-perosamine synthase; EC 2.6.1.102 from Caulobacter vibrioides
Q9A9H3: GDP-perosamine synthase (EC 2.6.1.102) from Caulobacter vibrioides

36% id,
96% cov

eryCI / P14290: dTDP-3-oxo-3,4,6-trideoxy-α-D-glucopyranose transaminase monomer (EC 2.6.1.106) from Saccharopolyspora erythraea

34% id,
95% cov

GDPPS_ECO57 / Q7DBF3: GDP-perosamine synthase; EC 2.6.1.102 from Escherichia coli
perA / Q7DBF3: GDP-perosamine synthase monomer (EC 2.6.1.102) from Escherichia coli

32% id,
98% cov

More...

Shewana3_0360: alanine-glyoxylate aminotransferase (RefSeq)
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

36% id,
94% cov

PUCG_BACSU / O32148: (S)-ureidoglycine--glyoxylate transaminase; UGXT; (S)-ureidoglycine--glyoxylate aminotransferase; Purine catabolism protein PucG; EC 2.6.1.112 from Bacillus subtilis

36% id,
91% cov

D8V0F7: (S)-ureidoglycine-glyoxylate transaminase (EC 2.6.1.112) from Bacillus subtilis

36% id,
90% cov

Shewana3_2520: aminotransferase (RefSeq)
is similar to:
PaperBLAST

BIOK_BACSU / P53555: L-Lysine--8-amino-7-oxononanoate transaminase; 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; 7,8-diaminononanoate synthase; DANS; Diaminopelargonic acid synthase; L-Lysine--8-amino-7-oxononanoate aminotransferase; EC 2.6.1.105 from Bacillus subtilis
bioK / P53555: lysine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.105) from Bacillus subtilis
P53555: lysine-8-amino-7-oxononanoate transaminase (EC 2.6.1.105) from Bacillus subtilis

34% id,
97% cov

AZOBR_RS19025: acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] from Azospirillum brasilense

32% id,
99% cov

ARGD_SALTY / P40732: Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17 from Salmonella typhimurium

32% id,
99% cov

More...

Shewana3_3071: glutamate-1-semialdehyde aminotransferase (RefSeq)
is similar to:
PaperBLAST

D1C218: beta-alanine-pyruvate transaminase (EC 2.6.1.18) from Sphaerobacter thermophilus

34% id,
93% cov

KAT_CLOAI / B0VH76: 3-aminobutyryl-CoA aminotransferase; HemL-like protein; EC 2.6.1.111 from Cloacimonas acidaminovorans
B0VH76: 3-aminobutanoyl-CoA transaminase (EC 2.6.1.111) from Candidatus Cloacimonas

32% id,
99% cov

gabT / Q4KKA1: 4-aminobutyrate transaminase subunit (EC 2.6.1.19) from Pseudomonas fluorescens

33% id,
84% cov

More...

Shewana3_2145: aminotransferase AlaT (RefSeq)
is similar to:
PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

29% id,
97% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

29% id,
95% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

27% id,
98% cov

More...

Shewana3_0929: GntR family transcriptional regulator (RefSeq)
is similar to:
PaperBLAST

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

20% id,
97% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

23% id,
79% cov

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

21% id,
82% cov

More...

Shewana3_3113: sugar isomerase (SIS) (RefSeq)
is similar to:
PaperBLAST

GLMS_SULTO / F9VPA4: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Glutamine:fructose-6-phosphate amidotransferase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Sulfurisphaera tokodaii
glmS / F9VPA4: glutamine—fructose-6-phosphate transaminase (EC 2.6.1.16) from Sulfurisphaera tokodaii

30% id,
55% cov

Q8G545: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Bifidobacterium longum

28% id,
58% cov

GLMS_BACSU / P0CI73: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Bacillus subtilis

29% id,
54% cov

More...

Shewana3_1483: amidophosphoribosyltransferase (RefSeq)
is similar to:
PaperBLAST

GLMS_METMP / Q6LWM9: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Methanococcus maripaludis

31% id,
35% cov

GLMS_BACSU / P0CI73: Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine--D-fructose-6-phosphate amidotransferase; EC 2.6.1.16 from Bacillus subtilis

27% id,
39% cov

D3YIG6: glutamine-fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) from Sporothrix schenckii

25% id,
35% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory