Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 24 curated entries in PaperBLAST's database that match '2.6.1.13'.

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0610: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

37% id,
95% cov

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

37% id,
90% cov

OAT_RAT / P04182: Ornithine aminotransferase, mitochondrial; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Rattus norvegicus
P04182: ornithine aminotransferase (EC 2.6.1.13) from Rattus norvegicus

38% id,
88% cov

More...

Shewana3_3091: 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

36% id,
92% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

35% id,
92% cov

otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans

33% id,
92% cov

More...

Shewana3_2520: aminotransferase (RefSeq)
is similar to:
PaperBLAST

δOAT / Q1RPP3: ornithine δ-aminotransferase (EC 2.6.1.13) from Pinus sylvestris

30% id,
90% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

28% id,
95% cov

otaA: ornithine aminotransferase; EC 2.6.1.13 from Emericella nidulans

30% id,
89% cov

More...

Shewana3_3106: beta alanine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

28% id,
96% cov

OAT_KLULA / Q6CWC1: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Kluyveromyces lactis

28% id,
94% cov

Echvi_0577: Ornithine aminotransferase (EC 2.6.1.13) from Echinicola vietnamensis

28% id,
93% cov

More...

Shewana3_3071: glutamate-1-semialdehyde aminotransferase (RefSeq)
is similar to:
PaperBLAST

OAT_YEAST / P07991: Ornithine aminotransferase; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Saccharomyces cerevisiae

29% id,
78% cov

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
76% cov

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis

27% id,
81% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3725282-3726685 (frame +2) on 248374
is similar to:
PaperBLAST

OAT_BACSU / P38021: Ornithine aminotransferase; OAT; Ornithine--oxo-acid aminotransferase; EC 2.6.1.13 from Bacillus subtilis
Also see hits to annotated proteins above

27% id,
100% cov

B1A0U3: ornithine aminotransferase (EC 2.6.1.13) from Pisum sativum
Also see hits to annotated proteins above

30% id,
87% cov

Q98TS5: ornithine aminotransferase (EC 2.6.1.13) from Xenopus laevis
Also see hits to annotated proteins above

27% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory