Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.36'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3091: 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

36% id,
92% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

28% id,
88% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

26% id,
91% cov

More...

Shewana3_3106: beta alanine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

28% id,
91% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

21% id,
91% cov

Shewana3_2520: aminotransferase (RefSeq)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

26% id,
91% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

23% id,
90% cov

Shewana3_0610: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

25% id,
91% cov

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

29% id,
73% cov

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

34% id,
56% cov

More...

Shewana3_3071: glutamate-1-semialdehyde aminotransferase (RefSeq)
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

29% id,
76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory