Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 110 curated entries in PaperBLAST's database that match '2.6.1.5'.

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2121: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

63% id,
100% cov

HP15_858: phenylalanine aminotransferase (EC 2.6.1.57) from Marinobacter adhaerens

51% id,
99% cov

PP_3590: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pseudomonas putida

48% id,
99% cov

More...

Shewana3_1973: phosphoserine aminotransferase (RefSeq)
is similar to:
PaperBLAST

SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli
SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli

59% id,
100% cov

SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Drosophila melanogaster

44% id,
98% cov

Q2F5M8: phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori

42% id,
100% cov

More...

Shewana3_1974: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

HP15_858: phenylalanine aminotransferase (EC 2.6.1.57) from Marinobacter adhaerens

50% id,
99% cov

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

49% id,
100% cov

Pf6N2E2_2632: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

49% id,
98% cov

More...

Shewana3_0360: alanine-glyoxylate aminotransferase (RefSeq)
is similar to:
PaperBLAST

AGT1_RABIT / P31030: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Oryctolagus cuniculus

41% id,
97% cov

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens

39% id,
97% cov

AGT1_RAT / P09139: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase, mitochondrial; SPT; EC 2.6.1.44; EC 2.6.1.51 from Rattus norvegicus
Agxt / P09139: serine-pyruvate aminotransferase, mitochondrial subunit (EC 2.6.1.51) from Rattus norvegicus

40% id,
92% cov

More...

Shewana3_3091: 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

35% id,
91% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

27% id,
91% cov

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

25% id,
85% cov

Shewana3_3071: glutamate-1-semialdehyde aminotransferase (RefSeq)
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

34% id,
87% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

30% id,
76% cov

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

29% id,
73% cov

Shewana3_2145: aminotransferase AlaT (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

29% id,
96% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
96% cov

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

27% id,
95% cov

More...

Shewana3_1852: histidinol phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

31% id,
89% cov

Shewana3_2520: aminotransferase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

28% id,
95% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

27% id,
91% cov

Shewana3_0610: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

28% id,
93% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

27% id,
93% cov

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

29% id,
87% cov

Shewana3_3106: beta alanine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

28% id,
93% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

30% id,
78% cov

Shewana3_0929: GntR family transcriptional regulator (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

27% id,
94% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

25% id,
97% cov

AATR1_SCHPO / O14192: Aromatic amino acid aminotransferase C56E4.03; EC 2.6.1.57 from Schizosaccharomyces pombe

24% id,
73% cov

More...

Shewana3_1908: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

Q4R0W2: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces ribosidificus

37% id,
63% cov

WECE_ECOLI / P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase; EC 2.6.1.59 from Escherichia coli
Rff / b3791: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
wecE / P27833: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase (EC 2.6.1.59) from Escherichia coli

34% id,
67% cov

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae

38% id,
55% cov

More...

Shewana3_2686: pyridoxal-dependent decarboxylase (RefSeq)
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

22% id,
87% cov

Shewana3_1303: polysaccharide biosynthesis protein (RefSeq)
is similar to:
PaperBLAST

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae

31% id,
62% cov

GLSA_STRGR / P77952: L-glutamine:scyllo-inosose aminotransferase; Glutamine--scyllo-inositol transaminase; EC 2.6.1.50 from Streptomyces griseus
stsC / P77952: L:glutamine:2-keto-myo-inositol aminotransferase subunit (EC 2.6.1.50) from Streptomyces griseus

31% id,
63% cov

Q4R0W2: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces ribosidificus

30% id,
52% cov

Shewana3_2266: GntR family transcriptional regulator (RefSeq)
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

26% id,
71% cov

A0A1D8PPA8: aromatic-amino-acid transaminase (EC 2.6.1.57) from Candida albicans

24% id,
52% cov

AATR2_SCHPO / O94570: Aromatic amino acid aminotransferase C1773.13; EC 2.6.1.57 from Schizosaccharomyces pombe

24% id,
42% cov

Shewana3_0808: cysteine desulfurase (RefSeq)
is similar to:
PaperBLAST

Q97VM5: serine-pyruvate transaminase (EC 2.6.1.51) from Saccharolobus solfataricus

21% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2264643-2266022 (frame -3) on 248374
is similar to:
PaperBLAST

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae
Also see hits to annotated proteins above

32% id,
72% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory