Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 16 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3894: shikimate kinase I (RefSeq)
is similar to:

Q8NMT0: gluconokinase (EC from Corynebacterium glutamicum

25% id,
98% cov

Shewana3_1619: serine/threonine protein kinase (RefSeq)
is similar to:

Q29502: gluconokinase (EC from Oryctolagus cuniculus

33% id,
38% cov

Q61036: gluconokinase (EC; non-specific serine/threonine protein kinase (EC from Mus musculus

34% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory