Curated BLAST
Searching in Shewanella sp. ANA-3 (ANA3)
Found 31 curated entries in PaperBLAST's database that match '2.7.1.15' as complete word(s).
These curated entries have 24 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella sp. ANA-3, or try another query
Shewana3_3477: ribokinase (RefSeq)
is similar to: | PaperBLAST |
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae | 51% id,
97% cov |
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli | 50% id,
96% cov |
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis | 49% id,
96% cov |
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae | 45% id,
99% cov |
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron | 46% id,
92% cov |
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 43% id,
98% cov |
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 41% id,
98% cov |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 41% id,
98% cov |
BT2804: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron | 42% id,
95% cov |
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus
A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus | 40% id,
99% cov |
RBSK_SCHPO / O60116: Ribokinase; RK; EC 2.7.1.15 from Schizosaccharomyces pombe | 38% id,
97% cov |
H281DRAFT_01116: deoxyribose kinase (EC 2.7.1.15) from Paraburkholderia bryophila | 38% id,
94% cov |
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti | 36% id,
98% cov |
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum | 36% id,
94% cov |
BPHYT_RS25805: deoxyribose kinase (EC 2.7.1.15) from Burkholderia phytofirmans | 37% id,
91% cov |
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major | 36% id,
93% cov |
P71913: ribokinase (EC 2.7.1.15) from Mycobacterium tuberculosis | 32% id,
90% cov |
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana | 33% id,
80% cov |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 40% id,
56% cov |
More... |
Shewana3_0069: ribokinase-like domain-containing protein (RefSeq)
is similar to: | PaperBLAST |
AO356_00950: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 26% id,
90% cov |
RBSK_ECOLI / P0A9J6: Ribokinase; RK; EC 2.7.1.15 from Escherichia coli
RbsK / b3752: ribokinase (EC 2.7.1.15) from Escherichia coli
rbsK / P0A9J6: ribokinase (EC 2.7.1.15) from Escherichia coli | 24% id,
88% cov |
RBSK_STAAC / A0A0H2WZY4: Ribokinase; RK; EC 2.7.1.15 from Staphylococcus aureus
A0A0H2WZY4: ribokinase (EC 2.7.1.15) from Staphylococcus aureus | 23% id,
89% cov |
BWI76_RS00290: Ribokinase (EC 2.7.1.15) from Klebsiella michiganensis | 27% id,
42% cov |
RBSK_HUMAN / Q9H477: Ribokinase; RK; EC 2.7.1.15 from Homo sapiens
Q9H477: ribokinase (EC 2.7.1.15) from Homo sapiens | 27% id,
41% cov |
A0A0H2UL04: ribokinase (EC 2.7.1.15) from Vibrio cholerae | 24% id,
42% cov |
AO353_20835: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 34% id,
30% cov |
Pf1N1B4_6031: Ribokinase (EC 2.7.1.15) from Pseudomonas fluorescens | 33% id,
30% cov |
HSERO_RS11500: Ribokinase (EC 2.7.1.15) from Herbaspirillum seropedicae | 28% id,
29% cov |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 26% id,
24% cov |
More... |
Shewana3_0268: site-specific DNA-methyltransferase (adenine-specific) (RefSeq)
is similar to: | PaperBLAST |
P71913: ribokinase (EC 2.7.1.15) from Mycobacterium tuberculosis | 26% id,
89% cov |
SMc01103: Ribokinase (EC 2.7.1.15) from Sinorhizobium meliloti | 23% id,
99% cov |
RBSK_YEAST / P25332: Ribokinase; RK; EC 2.7.1.15 from Saccharomyces cerevisiae | 29% id,
43% cov |
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major | 29% id,
33% cov |
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum | 26% id,
35% cov |
BT2803: ribokinase (EC 2.7.1.15) from Bacteroides thetaiotaomicron | 33% id,
27% cov |
Q8NQR0: ribokinase (EC 2.7.1.15) from Corynebacterium glutamicum | 38% id,
23% cov |
RBSK_LEIMA / E9AD19: Ribokinase; RK; EC 2.7.1.15 from Leishmania major | 28% id,
25% cov |
RBSK_ARATH / A1A6H3: Ribokinase; AtRBSK; RK; EC 2.7.1.15 from Arabidopsis thaliana
RBSK / A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana
A1A6H3: ribokinase (EC 2.7.1.15) from Arabidopsis thaliana | 29% id,
21% cov |
RBSKI_FRUSL / P83534: Bifunctional ribokinase/ribose-5-phosphate isomerase A; EC 2.7.1.15; EC 5.3.1.6 from Fructilactobacillus sanfranciscensis | 36% id,
15% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory