Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 12 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0069: ribokinase-like domain-containing protein (RefSeq)
is similar to:

kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC from Dickeya dadantii

26% id,
85% cov

YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC; EC from Escherichia coli
kdgK / P37647: 2-dehydro-3-deoxygluconokinase (EC from Escherichia coli

25% id,
85% cov

Shewana3_3477: ribokinase (RefSeq)
is similar to:

kdgK / Q9WXS2: 2-keto-3-deoxygluconate kinase (EC from Thermotoga maritima

24% id,
86% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory