Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 1 curated entries in PaperBLAST's database that match '2.7.1.229'.

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3477: ribokinase (RefSeq)
is similar to:
PaperBLAST

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

36% id,
95% cov

Shewana3_0268: site-specific DNA-methyltransferase (adenine-specific) (RefSeq)
is similar to:
PaperBLAST

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

37% id,
31% cov

Shewana3_0069: ribokinase-like domain-containing protein (RefSeq)
is similar to:
PaperBLAST

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

28% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory