Searching in Shewanella sp. ANA-3 (ANA3)
Found 19 curated entries in PaperBLAST's database that match '2.7.1.39' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella sp. ANA-3, or try another query
| Shewana3_1140: homoserine kinase (RefSeq) is similar to: | PaperBLAST |
KHSE_ECOLI / P00547: Homoserine kinase; HK; HSK; EC 2.7.1.39 from Escherichia coli | 55% id, 99% cov |
Echvi_2001: homoserine kinase (EC 2.7.1.39) from Echinicola vietnamensis | 37% id, 89% cov |
N515DRAFT_0576: homoserine kinase (EC 2.7.1.39) from Dyella japonica | 35% id, 87% cov |
| Shewana3_3894: shikimate kinase I (RefSeq) is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 33% id, 86% cov |
| Shewana3_0766: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (RefSeq) is similar to: | PaperBLAST |
CA265_RS23470: homoserine kinase (EC 2.7.1.39) from Pedobacter sp. | 25% id, 57% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4672717-4673247 (frame -2) on 248374 is similar to: | PaperBLAST |
thrB / B8DPL9: homoserine kinase (EC 2.7.1.39) from Desulfovibrio vulgaris | 32% id, 92% cov |
Lawrence Berkeley National Laboratory