Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 28 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 21 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_1552: acetate kinase (RefSeq)
is similar to:

E3W769: acetate kinase (EC from Shewanella sp.

84% id,
100% cov

ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC from Escherichia coli
AckA / b2296: acetate kinase (EC; EC; EC; EC from Escherichia coli
ackA / RF|NP_416799: acetate kinase; EC from Escherichia coli
P0A6A3: acetate kinase (EC from Escherichia coli

64% id,
100% cov

ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC from Salmonella typhimurium
P63411: acetate kinase (EC from Salmonella enterica

64% id,
100% cov


Shewana3_3197: phosphoribosylglycinamide formyltransferase 2 (RefSeq)
is similar to:

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli

68% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory