Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 17 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3197: phosphoribosylglycinamide formyltransferase 2 (RefSeq)
is similar to:

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC; EC from Escherichia coli

68% id,
99% cov

Shewana3_1552: acetate kinase (RefSeq)
is similar to:

AckA / b2296: acetate kinase (EC; EC; EC; EC from Escherichia coli
ackA / P0A6A3: acetate kinase (EC; EC from Escherichia coli

64% id,
100% cov

ackA / P71104: acetate kinase monomer (EC from Clostridium acetobutylicum

47% id,
99% cov

ackA / E3PRH0: acetate kinase (EC from Acetoanaerobium sticklandii

46% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory