Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 182 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 139 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2311: alpha amylase, catalytic region (RefSeq)
is similar to:
PaperBLAST

Shewana3_2311: Alpha-glucosidase (EC 3.2.1.20) from Shewanella sp.

100% id,
100% cov

Psest_0870: Alpha-glucosidase (EC 3.2.1.20) from Pseudomonas stutzeri

59% id,
94% cov

BAL49684.1: α-glucosidase (AglA;HaG) (EC 3.2.1.20)

56% id,
99% cov

More...

Shewana3_1931: alpha-glucosidase (RefSeq)
is similar to:
PaperBLAST

AEW20125.1: α-glucosidase (SusB;Aglu;BFO_2272) (EC 3.2.1.20)

40% id,
97% cov

Shewana3_2313: alpha amylase, catalytic region (RefSeq)
is similar to:
PaperBLAST

AAA57313.1: α-glucosidase (AglA) (EC 3.2.1.20)
AAZ54871.1: α-glucosidase (Tfu_0833) (EC 3.2.1.20)

27% id,
66% cov

AAB82327.1: α-glucosidase 1 (Mav1) (EC 3.2.1.20)

24% id,
61% cov

ACM89182.1: α-1,6-glucosidase 1 (Agl1; Bbr_1855) (EC 3.2.1.10|3.2.1.20)

27% id,
46% cov

More...

Shewana3_2314: alpha amylase, catalytic region (RefSeq)
is similar to:
PaperBLAST

BAA12704.1: α-glucosidase / exo-α-1,4-glucosidase (EC 3.2.1.20)

24% id,
36% cov

BAE48285.1: α-glucosidase (Gsj) (EC 3.2.1.20)
Q33E90: alpha-glucosidase (EC 3.2.1.20) from Geobacillus sp.

24% id,
36% cov

BAB59003.1: α-glucosidase / maltase (MalT;AO090038000234) (EC 3.2.1.20)

23% id,
38% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory