Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 46 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_1963: cytoplasmic asparaginase I (RefSeq)
is similar to:
PaperBLAST

ASPG1_ECOLI / P0A962: L-asparaginase 1; L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I; EC 3.5.1.1 from Escherichia coli
AnsA / b1767: L-asparaginase 1 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli

69% id,
100% cov

CA265_RS25090: L-asparaginase (EC 3.5.1.1) from Pedobacter sp.

42% id,
100% cov

AO353_09960: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

37% id,
97% cov

More...

Shewana3_1895: peptidase T2, asparaginase 2 (RefSeq)
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

50% id,
97% cov

Q8GXG1: asparaginase (EC 3.5.1.1) from Arabidopsis thaliana

40% id,
99% cov

Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

40% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory