Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2697: N-acetylglucosamine 6-phosphate deacetylase (RefSeq)
is similar to:
PaperBLAST

AGAA2_SHESA / A0KYQ5: N-acetylgalactosamine-6-phosphate deacetylase; GalNAc-6-P deacetylase; N-acetylglucosamine-6-phosphate deacetylase; GlcNAc-6-P deacetylase; EC 3.5.1.-; EC 3.5.1.25 from Shewanella sp.
agaAII / A0KYQ5: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

100% id,
100% cov

Shew_1117: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella loihica

50% id,
99% cov

SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis

50% id,
99% cov

More...

Shewana3_3112: N-acetylglucosamine 6-phosphate deacetylase (RefSeq)
is similar to:
PaperBLAST

Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

100% id,
100% cov

SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis

95% id,
100% cov

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

74% id,
99% cov

More...

Shewana3_0019: amidohydrolase (RefSeq)
is similar to:
PaperBLAST

nagA / A3CQ16: N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis

30% id,
33% cov

Q8DN83: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae

37% id,
19% cov

AAN79225.1: c0752 (NagA) (EC 3.5.1.25) from

36% id,
14% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory