Searching in Shewanella sp. ANA-3 (ANA3)
Found 8 curated entries in PaperBLAST's database that match '3.5.1.30'.
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query
Shewana3_3642: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) is similar to: | PaperBLAST |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 34% id, 80% cov |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 31% id, 84% cov |
B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 33% id, 80% cov |
Shewana3_1004: apolipoprotein N-acyltransferase (RefSeq) is similar to: | PaperBLAST |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 23% id, 56% cov |
Pf1N1B4_2504: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 23% id, 56% cov |
AO353_07425: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 22% id, 58% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
4374228-4375094 (frame -3) on 248374 is similar to: | PaperBLAST |
PfGW456L13_1170: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens | 33% id, 89% cov |
B3IVI7: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 34% id, 85% cov |
davA / Q88QV2: 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida | 34% id, 85% cov |
Lawrence Berkeley National Laboratory