Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 3 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3941: carboxypeptidase (RefSeq)
is similar to:

DAPEL_PRIM1 / D5E0A1: N-acetyldiaminopimelate deacetylase; EC from Priestia megaterium

32% id,
98% cov

DAPEL_BACSU / O34916: N-acetyldiaminopimelate deacetylase; EC from Bacillus subtilis
ykuR / O34916: N-acetyl-diaminopimelate deacetylase (EC from Bacillus subtilis

32% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory