Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 12 curated entries in PaperBLAST's database that match '3.5.1.94'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3099: peptidase C26 (RefSeq)
is similar to:
PaperBLAST

SO1267: Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) from Shewanella oneidensis

95% id,
100% cov

Sama_2645: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Shewanella amazonensis

77% id,
98% cov

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

64% id,
96% cov

More...

Shewana3_1236: GMP synthase (RefSeq)
is similar to:
PaperBLAST

AO356_13140: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

25% id,
91% cov

Sama_2645: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Shewanella amazonensis

30% id,
65% cov

Pf6N2E2_4510: Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) from Pseudomonas fluorescens

25% id,
77% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory