Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0098: imidazolonepropionase (RefSeq)
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

97% id,
100% cov

hutI / O31200: imidazolonepropionase (EC 3.5.2.7) from Pseudomonas putida

57% id,
98% cov

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

57% id,
98% cov

More...

Shewana3_1403: amidohydrolase (RefSeq)
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

22% id,
85% cov

Shewana3_1402: hypothetical protein (RefSeq)
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

30% id,
24% cov

Shewana3_4036: amidohydrolase 3 (RefSeq)
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

31% id,
20% cov

AO353_12280: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

42% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory