Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 19 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3465: agmatine deiminase (RefSeq)
is similar to:

AGUA_PSEAE / Q9I6J9: Agmatine deiminase; Agmatine iminohydrolase; EC from Pseudomonas aeruginosa
aguA / Q9I6J9: agmatine deiminase subunit (EC from Pseudomonas aeruginosa
Q9I6J9: agmatine deiminase (EC from Pseudomonas aeruginosa

57% id,
98% cov

AO356_10030: Agmatine deiminase (EC from Pseudomonas fluorescens

56% id,
99% cov

AGUA_ARATH / Q8GWW7: Agmatine deiminase; Agmatine iminohydrolase; Protein EMBRYO DEFECTIVE 1873; EC from Arabidopsis thaliana
At5g08170 / Q8GWW7: agmatine iminohydrolase (EC from Arabidopsis thaliana

53% id,
96% cov


Shewana3_3642: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq)
is similar to:

Q89413: agmatine deiminase (EC from Chlorella virus

28% id,
66% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4374228-4375094 (frame -3) on 248374
is similar to:

Q89413: agmatine deiminase (EC from Chlorella virus
Also see hits to annotated proteins above

26% id,
84% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory