Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 2 curated entries in PaperBLAST's database that match ''.

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2857: fumarylacetoacetate (FAA) hydrolase (RefSeq)
is similar to:

HSERO_RS06355: 2,4-diketo-3-deoxy-L-fuconate hydrolase (EC from Herbaspirillum seropedicae

32% id,
67% cov

lra6 / Q1NEI7: L-2,4-diketo-3-deoxyrhamnonate hydrolase (EC from Sphingomonas sp.

29% id,
74% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory