Searching in Shewanella sp. ANA-3 (ANA3)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18'.
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella sp. ANA-3, or try another query
Shewana3_0390: diaminopimelate decarboxylase (RefSeq) is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 32% id, 100% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 24% id, 95% cov |
Shewana3_3871: ornithine decarboxylase (RefSeq) is similar to: | PaperBLAST |
Q9Z4R7: lysine decarboxylase (EC 4.1.1.18) from Eikenella corrodens | 34% id, 94% cov |
LDCA_PSEAE / Q9I2S7: Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa | 35% id, 88% cov |
LDCI_ECOLI / P0A9H3: Inducible lysine decarboxylase; LDCI; EC 4.1.1.18 from Escherichia coli | 32% id, 94% cov |
Shewana3_3682: ornithine decarboxylase (RefSeq) is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 31% id, 90% cov |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 32% id, 63% cov |
Shewana3_2686: pyridoxal-dependent decarboxylase (RefSeq) is similar to: | PaperBLAST |
desA / Q9L072: L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor | 27% id, 91% cov |
bibA / B6EP92: L-lysine decarboxylase (EC 4.1.1.18) from Aliivibrio salmonicida | 26% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory