Searching in Shewanella sp. ANA-3 (ANA3)
Found 26 curated entries in PaperBLAST's database that match '4.1.1.20' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Shewanella sp. ANA-3, or try another query
| Shewana3_0390: diaminopimelate decarboxylase (RefSeq) is similar to: | PaperBLAST |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 70% id, 100% cov |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 49% id, 96% cov |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 44% id, 98% cov |
| Shewana3_3682: ornithine decarboxylase (RefSeq) is similar to: | PaperBLAST |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 29% id, 92% cov |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 29% id, 92% cov |
lysA / P23630: diaminopimelate decarboxylase subunit (EC 4.1.1.20) from Bacillus subtilis | 28% id, 86% cov |
| Shewana3_0652: aspartate kinase III (RefSeq) is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 34% id, 52% cov |
| Shewana3_1624: arginine decarboxylase (RefSeq) is similar to: | PaperBLAST |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 24% id, 66% cov |
P56129: diaminopimelate decarboxylase (EC 4.1.1.20) from Helicobacter pylori | 23% id, 66% cov |
DCDA_METJA / Q58497: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii | 24% id, 59% cov |
| Shewana3_1139: bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 29% id, 52% cov |
| Shewana3_3613: bifunctional aspartate kinase II/homoserine dehydrogenase II (RefSeq) is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 26% id, 55% cov |
| Shewana3_1129: aspartate kinase (RefSeq) is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 27% id, 46% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory