Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 10 curated entries in PaperBLAST's database that match '4.1.2.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_2065: L-ribulose-5-phosphate 4-epimerase (RefSeq)
is similar to:
PaperBLAST

BWI76_RS22915: L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis

25% id,
91% cov

F8D9F5: D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis

41% id,
33% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory