Searching in Shewanella sp. ANA-3 (ANA3)
Found 95 curated entries in PaperBLAST's database that match '4.1.99.1'.
These curated entries have 59 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Shewanella sp. ANA-3, or try another query
| Shewana3_1936: thiamine biosynthesis protein ThiC (RefSeq) is similar to: | PaperBLAST |
ThiC / b3994: phosphomethylpyrimidine synthase (EC 4.1.99.17) from Escherichia coli | 76% id, 97% cov |
THIC_SALTY / Q9L9I7: Phosphomethylpyrimidine synthase; Hydroxymethylpyrimidine phosphate synthase; HMP-P synthase; HMP-phosphate synthase; HMPP synthase; Thiamine biosynthesis protein ThiC; EC 4.1.99.17 from Salmonella typhimurium | 76% id, 95% cov |
THIC_CAUVC / Q9A6Q5: Phosphomethylpyrimidine synthase; Hydroxymethylpyrimidine phosphate synthase; HMP-P synthase; HMP-phosphate synthase; HMPP synthase; Thiamine biosynthesis protein ThiC; EC 4.1.99.17 from Caulobacter vibrioides | 62% id, 100% cov |
| Shewana3_0134: 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) is similar to: | PaperBLAST |
Q9KKP2: 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC 4.1.99.12) from Vibrio cholerae | 74% id, 96% cov |
P66032: 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC 4.1.99.12) from Salmonella enterica | 71% id, 97% cov |
RIBB_ECOLI / P0A7J0: 3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; DHBPS; EC 4.1.99.12 from Escherichia coli | 70% id, 97% cov |
| Shewana3_1941: thiamine biosynthesis protein ThiH (RefSeq) is similar to: | PaperBLAST |
THIH_ECOLI / P30140: 2-iminoacetate synthase; Dehydroglycine synthase; Tyrosine lyase; EC 4.1.99.19 from Escherichia coli | 54% id, 97% cov |
THIH_SALTY / Q9S498: 2-iminoacetate synthase; Dehydroglycine synthase; Tyrosine lyase; EC 4.1.99.19 from Salmonella typhimurium | 52% id, 98% cov |
| Shewana3_1098: GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) is similar to: | PaperBLAST |
RIBB_ECOLI / P0A7J0: 3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; DHBPS; EC 4.1.99.12 from Escherichia coli | 53% id, 91% cov |
P66032: 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC 4.1.99.12) from Salmonella enterica | 52% id, 91% cov |
RIB3_CANAL / Q5A3V6: 3,4-dihydroxy-2-butanone 4-phosphate synthase; DHBP synthase; EC 4.1.99.12 from Candida albicans | 49% id, 95% cov |
| Shewana3_3704: deoxyribodipyrimidine photolyase-related protein (RefSeq) is similar to: | PaperBLAST |
Q3IXP1: (6-4)DNA photolyase (EC 4.1.99.13) from Cereibacter sphaeroides | 44% id, 98% cov |
PHRB_AGRFC / A9CH39: (6-4) photolyase; (6-4)DNA photolyase; DNA photolyase PhrB; Photoreactivating enzyme PhrB; EC 4.1.99.13 from Agrobacterium fabrum | 41% id, 99% cov |
| Shewana3_0708: thiamine biosynthesis protein ThiH (RefSeq) is similar to: | PaperBLAST |
THIH_ECOLI / P30140: 2-iminoacetate synthase; Dehydroglycine synthase; Tyrosine lyase; EC 4.1.99.19 from Escherichia coli | 31% id, 93% cov |
THIH_SALTY / Q9S498: 2-iminoacetate synthase; Dehydroglycine synthase; Tyrosine lyase; EC 4.1.99.19 from Salmonella typhimurium | 33% id, 87% cov |
| Shewana3_1166: deoxyribodipyrimidine photo-lyase type I (RefSeq) is similar to: | PaperBLAST |
Q0E8P0: (6-4)DNA photolyase (EC 4.1.99.13) from Drosophila melanogaster | 28% id, 92% cov |
Q8SXK5: (6-4)DNA photolyase (EC 4.1.99.13) from Drosophila melanogaster | 28% id, 92% cov |
UVR3_ARATH / O48652: (6-4)DNA photolyase; Protein UV repair defective 3; EC 4.1.99.13 from Arabidopsis thaliana | 29% id, 88% cov |
| Shewana3_2600: GTP cyclohydrolase II (RefSeq) is similar to: | PaperBLAST |
A0A0H2UN41: 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC 4.1.99.12) from Streptococcus pneumoniae | 46% id, 48% cov |
A5U2B7: 3,4-dihydroxy-2-butanone-4-phosphate synthase (EC 4.1.99.12) from Mycobacterium tuberculosis | 46% id, 48% cov |
RIBA1_ARATH / P47924: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic; AtRIBA1; EC 4.1.99.12; EC 3.5.4.25 from Arabidopsis thaliana | 46% id, 35% cov |
| Shewana3_1555: formate acetyltransferase (RefSeq) is similar to: | PaperBLAST |
Q39VF1: benzylsuccinate synthase (EC 4.1.99.11) from Geobacter metallireducens | 22% id, 64% cov |
bssA / Q8VPT7: benzylsuccinate synthase α subunit (EC 4.1.99.11) from Aromatoleum toluolicum | 35% id, 6% cov |
I6LHT8: benzylsuccinate synthase (EC 4.1.99.11) from Azoarcus sp. | 35% id, 6% cov |
| Shewana3_3106: beta alanine--pyruvate transaminase (RefSeq) is similar to: | PaperBLAST |
P31015: tryptophanase (EC 4.1.99.1) from Symbiobacterium thermophilum | 34% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory