Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 22 curated entries in PaperBLAST's database that match '4.2.1.22' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_3614: cystathionine gamma-synthase (RefSeq)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

43% id,
96% cov

Shewana3_1561: cysteine synthase (RefSeq)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

41% id,
97% cov

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

40% id,
96% cov

Y1077_MYCTU / P9WP51: Probable cystathionine beta-synthase Rv1077; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Mycobacterium tuberculosis

41% id,
66% cov

More...

Shewana3_2643: methionine gamma-lyase (RefSeq)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

42% id,
93% cov

Shewana3_3188: cysteine synthase B (RefSeq)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

35% id,
100% cov

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

34% id,
98% cov

CYSO_AERPE / Q9YBL2: Protein CysO; Cystathionine beta-synthase; Cysteine synthase; O-acetylserine sulfhydrylase; O-phosphoserine sulfhydrylase; Serine sulfhydrase; EC 4.2.1.22; EC 2.5.1.47; EC 2.5.1.65 from Aeropyrum pernix

34% id,
72% cov

More...

Shewana3_2414: cystathionine beta-lyase (RefSeq)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

32% id,
94% cov

Shewana3_0359: threonine dehydratase (RefSeq)
is similar to:
PaperBLAST

cysK / P56067: cystathionine β-synthase (O-acetyl-L-serine) monomer (EC 4.2.1.22; EC 2.5.1.134; EC 2.5.1.47) from Helicobacter pylori

25% id,
95% cov

CBS_HUMAN / P35520: Cystathionine beta-synthase; Beta-thionase; Serine sulfhydrase; EC 4.2.1.22 from Homo sapiens
CBS / P35520: cystathionine β-synthase monomer (EC 4.2.1.22) from Homo sapiens
P35520: cystathionine beta-synthase (EC 4.2.1.22) from Homo sapiens

28% id,
65% cov

Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster

26% id,
62% cov

Shewana3_1576: cyclic nucleotide-binding protein (RefSeq)
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

22% id,
97% cov

Shewana3_0930: O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq)
is similar to:
PaperBLAST

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

35% id,
54% cov

CTH / P32929: cystathionine γ-lyase monomer (EC 4.4.1.1; EC 4.4.1.2; EC 4.2.1.22) from Homo sapiens

37% id,
39% cov

Shewana3_1059: CBS domain-containing protein (RefSeq)
is similar to:
PaperBLAST

Q5SK23: cystathionine beta-synthase (EC 4.2.1.22) from Thermus thermophilus

45% id,
25% cov

Shewana3_3483: CBS domain-containing protein (RefSeq)
is similar to:
PaperBLAST

Q9VRD9: cystathionine beta-synthase (EC 4.2.1.22) from Drosophila melanogaster

30% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory