Curated BLAST
Searching in Shewanella sp. ANA-3 (ANA3)
Found 15 curated entries in PaperBLAST's database that match '5.1.3.4' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Shewanella sp. ANA-3, or try another query
Shewana3_2065: L-ribulose-5-phosphate 4-epimerase (RefSeq)
is similar to: | PaperBLAST |
Shewana3_2065: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Shewanella sp. | 100% id,
100% cov |
Echvi_0503: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Echinicola vietnamensis | 60% id,
99% cov |
CA265_RS08620: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Pedobacter sp. | 55% id,
99% cov |
ARAD_ECOLI / P08203: L-ribulose-5-phosphate 4-epimerase AraD; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli
AraD / b0061: L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli
araD / GB|BAB96630.1: L-ribulose-5-phosphate 4-epimerase; EC 5.1.3.4 from Escherichia coli
araD / P08203: L-ribulose-5-phosphate 4-epimerase AraD (EC 5.1.3.4) from Escherichia coli | 52% id,
99% cov |
ULAF_ECOLI / P39306: L-ribulose-5-phosphate 4-epimerase UlaF; L-ascorbate utilization protein F; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli
YjfX / b4198: L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli
ulaF / P39306: L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) from Escherichia coli | 50% id,
99% cov |
SGBE_ECOLI / P37680: L-ribulose-5-phosphate 4-epimerase SgbE; Phosphoribulose isomerase; EC 5.1.3.4 from Escherichia coli
YiaS / b3583: L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli
sgbE / P37680: L-ribulose-5-phosphate 4-epimerase SgbE (EC 5.1.3.4) from Escherichia coli | 49% id,
99% cov |
ARAD_BACSU / P94525: L-ribulose-5-phosphate 4-epimerase; Phosphoribulose isomerase; EC 5.1.3.4 from Bacillus subtilis | 49% id,
98% cov |
C4B4W3: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) from Corynebacterium glutamicum | 37% id,
91% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory