Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella sp. ANA-3 (ANA3)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Shewanella sp. ANA-3, or try another query

Shewana3_0606: aminodeoxychorismate synthase, glutamine amidotransferase subunit (RefSeq)
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

54% id,
96% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

50% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

42% id,
99% cov

Shewana3_1519: anthranilate synthase component II (RefSeq)
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

48% id,
95% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

47% id,
95% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

36% id,
97% cov

Shewana3_0967: carbamoyl phosphate synthase small subunit (RefSeq)
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

29% id,
85% cov

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

25% id,
93% cov

Shewana3_1236: GMP synthase (RefSeq)
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

24% id,
99% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

23% id,
98% cov

Shewana3_3099: peptidase C26 (RefSeq)
is similar to:
PaperBLAST

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

30% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory