Curated BLAST for Genomes

 

Curated BLAST

Searching in Burkholderia phytofirmans PsJN (BFirm)

Found 14 curated entries in PaperBLAST's database that match '1.13.11.6' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Burkholderia phytofirmans PsJN, or try another query

BPHYT_RS07265: 3-hydroxyanthranilate 3,4-dioxygenase
is similar to:
PaperBLAST

3HAO_CUPMC / Q1LCS4: 3-hydroxyanthranilate 3,4-dioxygenase; 3-hydroxyanthranilate oxygenase; 3-HAO; 3-hydroxyanthranilic acid dioxygenase; HAD; EC 1.13.11.6 from Cupriavidus metallidurans

88% id,
100% cov

3HAO_PSEFL / Q83V26: 3-hydroxyanthranilate 3,4-dioxygenase; 3-hydroxyanthranilate oxygenase; 3-HAO; 3-hydroxyanthranilic acid dioxygenase; HAD; EC 1.13.11.6 from Pseudomonas fluorescens
nbaC / Q83V26: 3-hydroxyanthranilate 3,4-dioxygenase subunit (EC 1.13.11.6) from Pseudomonas fluorescens
Q83V26: 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) from Pseudomonas fluorescens

74% id,
94% cov

nbaC / A4IT48: 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) from Geobacillus thermodenitrificans

45% id,
93% cov

More...

BPHYT_RS29610: cupin
is similar to:
PaperBLAST

3HAO_BOVIN / Q0VCA8: 3-hydroxyanthranilate 3,4-dioxygenase; 3-hydroxyanthranilate oxygenase; 3-HAO; 3-hydroxyanthranilic acid dioxygenase; HAD; EC 1.13.11.6 from Bos taurus
Q0VCA8: 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) from Bos taurus

30% id,
29% cov

3HAO_HUMAN / P46952: 3-hydroxyanthranilate 3,4-dioxygenase; 3-hydroxyanthranilate oxygenase; 3-HAO; h3HAO; 3-hydroxyanthranilic acid dioxygenase; HAD; EC 1.13.11.6 from Homo sapiens
HAAO / P46952: 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) from Homo sapiens
P46952: 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) from Homo sapiens

28% id,
26% cov

3HAO_RAT / P46953: 3-hydroxyanthranilate 3,4-dioxygenase; 3-hydroxyanthranilate oxygenase; 3-HAO; 3-hydroxyanthranilic acid dioxygenase; HAD; EC 1.13.11.6 from Rattus norvegicus

28% id,
26% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory